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Development of a multiomics model for identification of predictive biomarkers for COVID-19 severity: a retrospective cohort study.
Byeon SK, Madugundu AK, Garapati K, Ramarajan MG, Saraswat M, Kumar-M P, Hughes T, Shah R, Patnaik MM, Chia N, Ashrafzadeh-Kian S, Yao JD, Pritt BS, Cattaneo R, Salama ME, Zenka RM, Kipp BR, Grebe SKG, Singh RJ, Sadighi Akha AA, Algeciras-Schimnich A, Dasari S, Olson JE, Walsh JR, Venkatakrishnan AJ, Jenkinson G, O'Horo JC, Badley AD, Pandey A. Byeon SK, et al. Among authors: walsh jr. Lancet Digit Health. 2022 Sep;4(9):e632-e645. doi: 10.1016/S2589-7500(22)00112-1. Epub 2022 Jul 11. Lancet Digit Health. 2022. PMID: 35835712 Free PMC article.
MaizeGDB 2018: the maize multi-genome genetics and genomics database.
Portwood JL 2nd, Woodhouse MR, Cannon EK, Gardiner JM, Harper LC, Schaeffer ML, Walsh JR, Sen TZ, Cho KT, Schott DA, Braun BL, Dietze M, Dunfee B, Elsik CG, Manchanda N, Coe E, Sachs M, Stinard P, Tolbert J, Zimmerman S, Andorf CM. Portwood JL 2nd, et al. Among authors: walsh jr. Nucleic Acids Res. 2019 Jan 8;47(D1):D1146-D1154. doi: 10.1093/nar/gky1046. Nucleic Acids Res. 2019. PMID: 30407532 Free PMC article.
A supervised learning method for classifying methylation disorders.
Walsh JR, Sun G, Balan J, Hardcastle J, Vollenweider J, Jerde C, Rumilla K, Koellner C, Koleilat A, Hasadsri L, Kipp B, Jenkinson G, Klee E. Walsh JR, et al. BMC Bioinformatics. 2024 Feb 12;25(1):66. doi: 10.1186/s12859-024-05673-1. BMC Bioinformatics. 2024. PMID: 38347515 Free PMC article.
COVID-19 Mortality Prediction From Deep Learning in a Large Multistate Electronic Health Record and Laboratory Information System Data Set: Algorithm Development and Validation.
Sankaranarayanan S, Balan J, Walsh JR, Wu Y, Minnich S, Piazza A, Osborne C, Oliver GR, Lesko J, Bates KL, Khezeli K, Block DR, DiGuardo M, Kreuter J, O'Horo JC, Kalantari J, Klee EW, Salama ME, Kipp B, Morice WG, Jenkinson G. Sankaranarayanan S, et al. Among authors: walsh jr. J Med Internet Res. 2021 Sep 28;23(9):e30157. doi: 10.2196/30157. J Med Internet Res. 2021. PMID: 34449401 Free PMC article.